neurobagel-recipes/scripts/data-config_template.ttl
Alyssa Dai dce25c4b76
[ENH] Add GraphDB setup script (#19)
* add graphdb setup script

* add template data-config.ttl

* add argparse and reassign command-line args to variables

* update help text

* echo statements for logging script progress

* change name of admin password arg

* check security before enabling, add confirm prompt for overwriting user permissions

* Greater clarity in printed statements

Co-authored-by: Sebastian Urchs <surchs@users.noreply.github.com>

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Co-authored-by: Sebastian Urchs <surchs@users.noreply.github.com>
2024-02-21 16:39:04 -05:00

49 lines
1.8 KiB
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#
# RDF4J configuration template for a GraphDB repository
#
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#>.
@prefix rep: <http://www.openrdf.org/config/repository#>.
@prefix sr: <http://www.openrdf.org/config/repository/sail#>.
@prefix sail: <http://www.openrdf.org/config/sail#>.
@prefix graphdb: <http://www.ontotext.com/config/graphdb#>.
[] a rep:Repository ;
rep:repositoryID "my_db" ;
rdfs:label "" ;
rep:repositoryImpl [
rep:repositoryType "graphdb:SailRepository" ;
sr:sailImpl [
sail:sailType "graphdb:Sail" ;
graphdb:read-only "false" ;
# Inference and Validation
graphdb:ruleset "rdfsplus-optimized" ;
graphdb:disable-sameAs "true" ;
graphdb:check-for-inconsistencies "false" ;
# Indexing
graphdb:entity-id-size "32" ;
graphdb:enable-context-index "false" ;
graphdb:enablePredicateList "true" ;
graphdb:enable-fts-index "false" ;
graphdb:fts-indexes ("default" "iri") ;
graphdb:fts-string-literals-index "default" ;
graphdb:fts-iris-index "none" ;
# Queries and Updates
graphdb:query-timeout "0" ;
graphdb:throw-QueryEvaluationException-on-timeout "false" ;
graphdb:query-limit-results "0" ;
# Settable in the file but otherwise hidden in the UI and in the RDF4J console
graphdb:base-URL "http://example.org/owlim#" ;
graphdb:defaultNS "" ;
graphdb:imports "" ;
graphdb:repository-type "file-repository" ;
graphdb:storage-folder "storage" ;
graphdb:entity-index-size "10000000" ;
graphdb:in-memory-literal-properties "true" ;
graphdb:enable-literal-index "true" ;
]
].